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Results of the 2020 fastMRI Challenge for Machine Learning MR Image Reconstruction

Authors
Muckley, Matthew J.Riemenschneider, BrunoRadmanesh, AlirezaKim, SunwooJeong, GeunuKo, JingyuJun, YohanShin, HyungseobHwang, DosikMostapha, MahmoudArberet, SimonNickel, DominikRamzi, ZaccharieCiuciu, PhilippeStarck, Jean-LucTeuwen, JonasKarkalousos, DimitriosZhang, ChaopingSriram, AnuroopHuang, ZhengnanYakubova, NafissaLui, Yvonne W.Knoll, Florian
Issue Date
Sep-2021
Publisher
IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
Keywords
Magnetic resonance imaging; Image reconstruction; Acceleration; Machine learning; Data models; Training; Pathology; Challenge; public data set; MR image reconstruction; machine learning; parallel imaging; compressed sensing; fast imaging; optimization
Citation
IEEE TRANSACTIONS ON MEDICAL IMAGING, v.40, no.9, pp 2306 - 2317
Pages
12
Journal Title
IEEE TRANSACTIONS ON MEDICAL IMAGING
Volume
40
Number
9
Start Page
2306
End Page
2317
URI
https://yscholarhub.yonsei.ac.kr/handle/2021.sw.yonsei/6583
DOI
10.1109/TMI.2021.3075856
ISSN
0278-0062
1558-254X
Abstract
Accelerating MRI scans is one of the principal outstanding problems in the MRI research community. Towards this goal, we hosted the second fastMRI competition targeted towards reconstructing MR images with subsampled k-space data. We provided participants with data from 7,299 clinical brain scans (de-identified via a HIPAA-compliant procedure by NYU Langone Health), holding back the fully-sampled data from 894 of these scans for challenge evaluation purposes. In contrast to the 2019 challenge, we focused our radiologist evaluations on pathological assessment in brain images. We also debuted a new Transfer track that required participants to submit models evaluated on MRI scanners from outside the training set. We received 19 submissions from eight different groups. Results showed one team scoring best in both SSIM scores and qualitative radiologist evaluations. We also performed analysis on alternative metrics to mitigate the effects of background noise and collected feedback from the participants to inform future challenges. Lastly, we identify common failure modes across the submissions, highlighting areas of need for future research in the MRI reconstruction community.
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